Index: trunk/ippTools/share/warptool_imfile.sql
===================================================================
--- trunk/ippTools/share/warptool_imfile.sql	(revision 19092)
+++ trunk/ippTools/share/warptool_imfile.sql	(revision 20608)
@@ -19,5 +19,6 @@
 JOIN rawImfile -- is there any reason not to refer back to rawimfiles?
     ON chipProcessedImfile.exp_id = rawImfile.exp_id
-    AND chipProcessedImfile.class_id = rawImfile.class_id 
+    AND chipProcessedImfile.class_id = rawImfile.class_id
+    AND rawImfile.ignored = 0
 WHERE
     warpRun.state = 'new'