Index: branches/pap/ippScripts/scripts/diff_skycell.pl
===================================================================
--- branches/pap/ippScripts/scripts/diff_skycell.pl	(revision 23532)
+++ branches/pap/ippScripts/scripts/diff_skycell.pl	(revision 23653)
@@ -248,10 +248,4 @@
         &my_die("Unable to perform ppSub: $error_code", $diff_id, $skycell_id, $error_code);
     }
-    &my_die("Couldn't find expected output file: $outputName", $diff_id, $skycell_id, $PS_EXIT_SYS_ERROR) unless $ipprc->file_exists($outputName);
-    &my_die("Couldn't find expected output file: $outputMask", $diff_id, $skycell_id, $PS_EXIT_SYS_ERROR) unless $ipprc->file_exists($outputMask);
-    &my_die("Couldn't find expected output file: $outputVariance", $diff_id, $skycell_id, $PS_EXIT_SYS_ERROR) unless $ipprc->file_exists($outputVariance);
-#    &my_die("Couldn't find expected output file: $outputSources", $diff_id, $skycell_id, $PS_EXIT_SYS_ERROR) unless $ipprc->file_exists($outputSources);
-#    &my_die("Couldn't find expected output file: $bin1Name",    $diff_id, $skycell_id, $PS_EXIT_SYS_ERROR) unless $ipprc->file_exists($bin1Name);
-#    &my_die("Couldn't find expected output file: $bin2Name",    $diff_id, $skycell_id, $PS_EXIT_SYS_ERROR) unless $ipprc->file_exists($bin2Name);
 
     my $outputStatsReal = $ipprc->file_resolve($outputStats);
@@ -270,4 +264,15 @@
     }
     chomp $cmdflags;
+
+    my ($quality) = $cmdflags =~ /-quality (\d+)/; # Quality flag
+
+    if (!$quality) {
+        &my_die("Couldn't find expected output file: $outputName", $diff_id, $skycell_id, $PS_EXIT_SYS_ERROR) unless $ipprc->file_exists($outputName);
+        &my_die("Couldn't find expected output file: $outputMask", $diff_id, $skycell_id, $PS_EXIT_SYS_ERROR) unless $ipprc->file_exists($outputMask);
+        &my_die("Couldn't find expected output file: $outputVariance", $diff_id, $skycell_id, $PS_EXIT_SYS_ERROR) unless $ipprc->file_exists($outputVariance);
+#        &my_die("Couldn't find expected output file: $outputSources", $diff_id, $skycell_id, $PS_EXIT_SYS_ERROR) unless $ipprc->file_exists($outputSources);
+#        &my_die("Couldn't find expected output file: $bin1Name",    $diff_id, $skycell_id, $PS_EXIT_SYS_ERROR) unless $ipprc->file_exists($bin1Name);
+#        &my_die("Couldn't find expected output file: $bin2Name",    $diff_id, $skycell_id, $PS_EXIT_SYS_ERROR) unless $ipprc->file_exists($bin2Name);
+    }
 }