Index: branches/tap_branches/ippTools/src/difftoolConfig.c
===================================================================
--- branches/tap_branches/ippTools/src/difftoolConfig.c	(revision 25900)
+++ branches/tap_branches/ippTools/src/difftoolConfig.c	(revision 27838)
@@ -38,5 +38,5 @@
     config->modules = pmConfigRead(&argc, argv, NULL);
     if (!config->modules) {
-        psError(PS_ERR_UNKNOWN, false, "Can't find site configuration");
+        psError(psErrorCodeLast(), false, "Can't find site configuration");
         psFree(config);
         return NULL;
@@ -56,4 +56,5 @@
     psMetadataAddStr(definerunArgs, PS_LIST_TAIL, "-set_data_group",  0,     "define data group", NULL);
     psMetadataAddStr(definerunArgs, PS_LIST_TAIL, "-set_dist_group",  0,     "define dist group", NULL);
+    psMetadataAddS16(definerunArgs, PS_LIST_TAIL, "-set_diff_mode", 0,       "specify type of difference (WW=1,WS=2,SW=3,SS=4)", 0);
     psMetadataAddStr(definerunArgs, PS_LIST_TAIL, "-set_note",  0,           "define note", NULL);
     psMetadataAddBool(definerunArgs, PS_LIST_TAIL, "-simple",  0,            "use the simple output format", false);
@@ -64,8 +65,10 @@
     psMetadataAddStr(updaterunArgs, PS_LIST_TAIL, "-state", 0,            "set state", NULL);
     psMetadataAddStr(updaterunArgs, PS_LIST_TAIL, "-label", 0,            "define by label instead of diff ID", 0);
+    psMetadataAddStr(updaterunArgs, PS_LIST_TAIL, "-data_group", 0,       "define by data_group instead of diff ID", 0);
     psMetadataAddStr(updaterunArgs, PS_LIST_TAIL, "-set_label", 0,        "define new value for label", 0);
     psMetadataAddStr(updaterunArgs, PS_LIST_TAIL, "-set_state", 0,        "define new state", NULL);
     psMetadataAddStr(updaterunArgs, PS_LIST_TAIL, "-set_data_group", 0,   "define new data_group", NULL);
     psMetadataAddStr(updaterunArgs, PS_LIST_TAIL, "-set_dist_group", 0,   "define new dist_group", NULL);
+    psMetadataAddS16(updaterunArgs, PS_LIST_TAIL, "-set_diff_mode", 0,       "specify type of difference (WW=1,WS=2,SW=3,SS=4)", 0);
     psMetadataAddStr(updaterunArgs, PS_LIST_TAIL, "-set_note", 0,         "define new note", NULL);
 
@@ -122,5 +125,5 @@
     psMetadataAddStr(adddiffskyfileArgs, PS_LIST_TAIL, "-hostname", 0,   "define hostname", 0);
     psMetadataAddF32(adddiffskyfileArgs, PS_LIST_TAIL, "-good_frac",  0, "define %% of good pixels", NAN);
-    psMetadataAddBool(adddiffskyfileArgs, PS_LIST_TAIL, "-magicked",  0, "define magicked state", false);
+    psMetadataAddS64(adddiffskyfileArgs, PS_LIST_TAIL, "-magicked",  0, "define magicked state", 0);
 
     // -advance
@@ -144,16 +147,44 @@
     psMetadataAddStr(diffskyfileArgs, PS_LIST_TAIL,  "-filter", 0,           "search for filter", NULL);
     psMetadataAddStr(diffskyfileArgs,  PS_LIST_TAIL, "-label",  PS_META_DUPLICATE_OK, "search by diffRun label (LIKE comparison)", NULL);
+    psMetadataAddStr(diffskyfileArgs,  PS_LIST_TAIL, "-data_group",  PS_META_DUPLICATE_OK, "search by diffRun data_group (LIKE comparison)", NULL);
+    psMetadataAddStr(diffskyfileArgs,  PS_LIST_TAIL, "-dist_group",  PS_META_DUPLICATE_OK, "search by diffRun dist_group (LIKE comparison)", NULL);
     psMetadataAddS16(diffskyfileArgs, PS_LIST_TAIL,  "-fault",  0,           "search by fault code", 0);
     pxmagicAddArguments(diffskyfileArgs);
     pxspaceAddArguments(diffskyfileArgs);
 
+    psMetadataAddBool(diffskyfileArgs, PS_LIST_TAIL, "-pstamp_order",  0,    "order results for postage stamp server", false);
     psMetadataAddBool(diffskyfileArgs, PS_LIST_TAIL, "-all",  0,             "search without arguments", false);
     psMetadataAddU64(diffskyfileArgs, PS_LIST_TAIL,  "-limit",  0,            "limit result set to N items", 0);
     psMetadataAddBool(diffskyfileArgs, PS_LIST_TAIL, "-simple",  0,          "use the simple output format", false);
 
+    // -listrun
+    psMetadata *listrunArgs = psMetadataAlloc();
+    psMetadataAddS64(listrunArgs, PS_LIST_TAIL,  "-diff_id", 0,           "search by diff ID", 0);
+    psMetadataAddStr(listrunArgs, PS_LIST_TAIL,  "-tess_id",  0,          "search by tessellation ID", NULL);
+    psMetadataAddStr(listrunArgs , PS_LIST_TAIL, "-warp_id",  0,         "search by warp_id", NULL);
+    psMetadataAddBool(listrunArgs, PS_LIST_TAIL, "-template",  0,        "apply exposure args to template of bothways diff", false);
+    psMetadataAddS64(listrunArgs, PS_LIST_TAIL,  "-exp_id",  0,           "search by exposure ID", 0);
+    psMetadataAddStr(listrunArgs , PS_LIST_TAIL, "-exp_name",  0,        "search by exposure name", NULL);
+    psMetadataAddTime(listrunArgs, PS_LIST_TAIL, "-dateobs_begin", 0,    "search for exposures by time (>=)", NULL);
+    psMetadataAddTime(listrunArgs, PS_LIST_TAIL, "-dateobs_end", 0,      "search for exposures by time (<=)", NULL);
+    psMetadataAddStr(listrunArgs, PS_LIST_TAIL,  "-filter", 0,           "search for filter", NULL);
+    psMetadataAddStr(listrunArgs,  PS_LIST_TAIL, "-label",  PS_META_DUPLICATE_OK, "search by diffRun label (LIKE comparison)", NULL);
+    psMetadataAddStr(listrunArgs,  PS_LIST_TAIL, "-data_group",  PS_META_DUPLICATE_OK, "search by diffRun data_group (LIKE comparison)", NULL);
+    psMetadataAddStr(listrunArgs,  PS_LIST_TAIL, "-dist_group",  PS_META_DUPLICATE_OK, "search by diffRun dist_group (LIKE comparison)", NULL);
+    pxmagicAddArguments(listrunArgs);
+    pxspaceAddArguments(listrunArgs);
+
+    psMetadataAddBool(listrunArgs, PS_LIST_TAIL, "-pstamp_order",  0,    "order results for postage stamp server", false);
+
+    psMetadataAddBool(listrunArgs, PS_LIST_TAIL, "-all",  0,             "search without arguments", false);
+    psMetadataAddU64(listrunArgs, PS_LIST_TAIL,  "-limit",  0,            "limit result set to N items", 0);
+    psMetadataAddBool(listrunArgs, PS_LIST_TAIL, "-simple",  0,          "use the simple output format", false);
+
+
     // -revertdiffskyfile
     psMetadata *revertdiffskyfileArgs = psMetadataAlloc();
     psMetadataAddS64(revertdiffskyfileArgs, PS_LIST_TAIL, "-diff_id", 0,            "search by diff ID", 0);
-    psMetadataAddStr(revertdiffskyfileArgs, PS_LIST_TAIL, "-label", 0, "search by label", NULL);
+    psMetadataAddStr(revertdiffskyfileArgs, PS_LIST_TAIL, "-skycell_id", 0, "search by skycell_id", NULL);
+    psMetadataAddStr(revertdiffskyfileArgs, PS_LIST_TAIL, "-label", PS_META_DUPLICATE_OK, "search by label", NULL);
     psMetadataAddS16(revertdiffskyfileArgs, PS_LIST_TAIL, "-fault",  0,            "search by fault code", 0);
     psMetadataAddBool(revertdiffskyfileArgs, PS_LIST_TAIL, "-all",  0, "allow no search terms", 0);
@@ -180,6 +211,8 @@
     psMetadataAddStr(definewarpstackArgs, PS_LIST_TAIL, "-tess_id", 0, "search by tess ID", NULL);
     psMetadataAddStr(definewarpstackArgs, PS_LIST_TAIL, "-filter", 0, "search by filter", NULL);
+    psMetadataAddStr(definewarpstackArgs, PS_LIST_TAIL, "-comment", 0, "search by comment (LIKE)", NULL);
     psMetadataAddStr(definewarpstackArgs, PS_LIST_TAIL, "-stack_label", 0, "search by stack label", NULL);
     psMetadataAddStr(definewarpstackArgs, PS_LIST_TAIL, "-warp_label", 0, "search by warp label", NULL);
+    psMetadataAddStr(definewarpstackArgs, PS_LIST_TAIL, "-data_group", 0, "search by data_group", NULL);
     psMetadataAddF32(definewarpstackArgs, PS_LIST_TAIL, "-good_frac", 0, "minimum good fraction of skycell", NAN);
     psMetadataAddStr(definewarpstackArgs, PS_LIST_TAIL, "-set_workdir", 0, "define workdir (required)", NULL);
@@ -192,5 +225,5 @@
     psMetadataAddBool(definewarpstackArgs, PS_LIST_TAIL, "-new-templates", 0, "also search for diffs with new template", false);
     psMetadataAddBool(definewarpstackArgs, PS_LIST_TAIL, "-rerun", 0, "define new run even if one exists", false);
-    psMetadataAddBool(definewarpstackArgs, PS_LIST_TAIL, "-available", 0, "define new run even if warpRun has some faults", false);
+    psMetadataAddBool(definewarpstackArgs, PS_LIST_TAIL, "-available", 0, "define new run even if no stacks available for some skycells", false);
     psMetadataAddBool(definewarpstackArgs, PS_LIST_TAIL, "-simple", 0, "use the simple output format", false);
     psMetadataAddBool(definewarpstackArgs, PS_LIST_TAIL, "-pretend", 0, "list results but to not queue", false);
@@ -217,5 +250,4 @@
     psMetadataAddStr(definewarpwarpArgs, PS_LIST_TAIL, "-set_note",  0,           "define note", NULL);
     psMetadataAddBool(definewarpwarpArgs, PS_LIST_TAIL, "-rerun", 0, "define new run even if one exists", false);
-    psMetadataAddBool(definewarpwarpArgs, PS_LIST_TAIL, "-available", 0, "define new run even if warpRun has some faults", false);
     psMetadataAddBool(definewarpwarpArgs, PS_LIST_TAIL, "-simple", 0, "use the simple output format", false);
     psMetadataAddBool(definewarpwarpArgs, PS_LIST_TAIL, "-pretend", 0, "list results but to not queue", false);
@@ -250,7 +282,30 @@
     psMetadataAddStr(definewarpwarpArgs,  PS_LIST_TAIL, "-comment",            0, "search by comment field (LIKE comparison)", NULL);
 
+    // -definestackstack
+    psMetadata *definestackstackArgs = psMetadataAlloc();
+    // stack id and exp id searches seem less useful here
+    psMetadataAddStr(definestackstackArgs, PS_LIST_TAIL, "-skycell_id", 0, "search by skycell ID", NULL);
+    psMetadataAddStr(definestackstackArgs, PS_LIST_TAIL, "-tess_id", 0, "search by tess ID", NULL);
+    psMetadataAddStr(definestackstackArgs, PS_LIST_TAIL, "-filter", 0, "search by filter", NULL);
+    psMetadataAddStr(definestackstackArgs, PS_LIST_TAIL, "-input_label", 0, "search by stack label for input", NULL);
+    psMetadataAddStr(definestackstackArgs, PS_LIST_TAIL, "-template_label", 0, "search by stack label for template", NULL);
+    psMetadataAddF32(definestackstackArgs, PS_LIST_TAIL, "-good_frac", 0, "minimum good fraction of skycell", NAN);
+    psMetadataAddStr(definestackstackArgs, PS_LIST_TAIL, "-set_workdir", 0, "define workdir (required)", NULL);
+    psMetadataAddStr(definestackstackArgs, PS_LIST_TAIL, "-set_label", 0, "define label", NULL);
+    psMetadataAddStr(definestackstackArgs, PS_LIST_TAIL, "-set_reduction", 0, "define reduction class", NULL);
+    psMetadataAddTime(definestackstackArgs, PS_LIST_TAIL, "-set_registered", 0, "time detrend run was registered", now);
+    psMetadataAddStr(definestackstackArgs, PS_LIST_TAIL, "-set_data_group", 0, "define data group", NULL);
+    psMetadataAddStr(definestackstackArgs, PS_LIST_TAIL, "-set_dist_group", 0, "define dist group", NULL);
+    psMetadataAddStr(definestackstackArgs, PS_LIST_TAIL, "-set_note", 0, "define note", NULL);
+    psMetadataAddBool(definestackstackArgs, PS_LIST_TAIL, "-rerun", 0, "define new run even if one exists", false);
+    psMetadataAddBool(definestackstackArgs, PS_LIST_TAIL, "-available", 0, "define new run even if no stacks available for some skycells", false);
+    psMetadataAddBool(definestackstackArgs, PS_LIST_TAIL, "-new-templates", 0, "also search for diffs with new template", false);
+    psMetadataAddBool(definestackstackArgs, PS_LIST_TAIL, "-simple", 0, "use the simple output format", false);
+    psMetadataAddBool(definestackstackArgs, PS_LIST_TAIL, "-pretend", 0, "list results but do not queue", false);
+
+
     // -pendingcleanuprun
     psMetadata *pendingcleanuprunArgs = psMetadataAlloc();
-    psMetadataAddStr(pendingcleanuprunArgs, PS_LIST_TAIL, "-label", PS_META_DUPLICATE_OK, "list blocks for specified label", NULL);
+    psMetadataAddStr(pendingcleanuprunArgs, PS_LIST_TAIL, "-label", PS_META_DUPLICATE_OK, "list runs for cleanup with specified label", NULL);
     psMetadataAddBool(pendingcleanuprunArgs, PS_LIST_TAIL, "-simple",  0,            "use the simple output format", false);
     psMetadataAddU64(pendingcleanuprunArgs, PS_LIST_TAIL, "-limit",  0,            "limit result set to N items", 0);
@@ -271,5 +326,6 @@
     psMetadata *updatediffskyfileArgs = psMetadataAlloc();
     psMetadataAddS64(updatediffskyfileArgs, PS_LIST_TAIL, "-diff_id", 0,      "define diff ID (required)", 0);
-    psMetadataAddS16(updatediffskyfileArgs, PS_LIST_TAIL, "-fault", 0,         "set fault code (required)", 0);
+    psMetadataAddS16(updatediffskyfileArgs, PS_LIST_TAIL, "-fault", 0,        "set fault code (required)", 0);
+    psMetadataAddStr(updatediffskyfileArgs, PS_LIST_TAIL, "-skycell_id", 0,   "search by skycell ID", NULL);
 
     // -tocleanedskyfile
@@ -287,4 +343,18 @@
     psMetadataAddS64(toscrubbedskyfileArgs, PS_LIST_TAIL, "-diff_id", 0, "difftool ID to update", 0);
     psMetadataAddStr(toscrubbedskyfileArgs, PS_LIST_TAIL, "-skycell_id", 0, "skycell ID to update", NULL);
+
+    // -tofullskyfile
+    psMetadata *tofullskyfileArgs = psMetadataAlloc();
+    psMetadataAddS64(tofullskyfileArgs, PS_LIST_TAIL, "-diff_id", 0, "difftool ID to update", 0);
+    psMetadataAddStr(tofullskyfileArgs, PS_LIST_TAIL, "-skycell_id", 0, "skycell ID to update", NULL);
+    psMetadataAddS64(tofullskyfileArgs, PS_LIST_TAIL, "-magicked",  0, "define magicked state", 0);
+
+    // -setskyfiletoupdate
+    psMetadata *setskyfiletoupdateArgs = psMetadataAlloc();
+    psMetadataAddS64(setskyfiletoupdateArgs, PS_LIST_TAIL, "-diff_id", 0,           "search by difftool ID (required)", 0);
+    psMetadataAddStr(setskyfiletoupdateArgs, PS_LIST_TAIL, "-skycell_id",  0,       "search by tessellation ID", NULL);
+    psMetadataAddStr(setskyfiletoupdateArgs, PS_LIST_TAIL, "-set_label",  0,        "new value for diffRun.label", NULL);
+
+
 
     // -exportrun
@@ -314,12 +384,16 @@
     PXOPT_ADD_MODE("-advance",          "", DIFFTOOL_MODE_ADVANCE,           advanceArgs);
     PXOPT_ADD_MODE("-diffskyfile",      "", DIFFTOOL_MODE_DIFFSKYFILE,       diffskyfileArgs);
+    PXOPT_ADD_MODE("-listrun",          "", DIFFTOOL_MODE_LISTRUN,           listrunArgs);
     PXOPT_ADD_MODE("-revertdiffskyfile","", DIFFTOOL_MODE_REVERTDIFFSKYFILE, revertdiffskyfileArgs);
     PXOPT_ADD_MODE("-definepoprun",     "", DIFFTOOL_MODE_DEFINEPOPRUN,      definepoprunArgs);
     PXOPT_ADD_MODE("-definewarpstack",  "", DIFFTOOL_MODE_DEFINEWARPSTACK,   definewarpstackArgs);
     PXOPT_ADD_MODE("-definewarpwarp",   "", DIFFTOOL_MODE_DEFINEWARPWARP,    definewarpwarpArgs);
+    PXOPT_ADD_MODE("-definestackstack", "", DIFFTOOL_MODE_DEFINESTACKSTACK,  definestackstackArgs);
     PXOPT_ADD_MODE("-pendingcleanuprun",     "show runs that need to be cleaned up", DIFFTOOL_MODE_PENDINGCLEANUPRUN,    pendingcleanuprunArgs);
     PXOPT_ADD_MODE("-pendingcleanupskyfile", "show runs that need to be cleaned up", DIFFTOOL_MODE_PENDINGCLEANUPSKYFILE, pendingcleanupskyfileArgs);
     PXOPT_ADD_MODE("-donecleanup",           "show runs that have been cleaned",     DIFFTOOL_MODE_DONECLEANUP,          donecleanupArgs);
     PXOPT_ADD_MODE("-updatediffskyfile",     "update fault code for a diffskyfile",  DIFFTOOL_MODE_UPDATEDIFFSKYFILE,          updatediffskyfileArgs);
+    PXOPT_ADD_MODE("-setskyfiletoupdate", "set cleaned skyfile to be updated", DIFFTOOL_MODE_SETSKYFILETOUPDATE, setskyfiletoupdateArgs);
+
     PXOPT_ADD_MODE("-exportrun",            "export run for import on other database", DIFFTOOL_MODE_EXPORTRUN, exportrunArgs);
     PXOPT_ADD_MODE("-importrun",            "import run from metadata file",           DIFFTOOL_MODE_IMPORTRUN, importrunArgs);
@@ -328,5 +402,6 @@
     PXOPT_ADD_MODE("-topurgedskyfile", "set skyfile as purged", DIFFTOOL_MODE_TOPURGEDSKYFILE, topurgedskyfileArgs);
     PXOPT_ADD_MODE("-toscrubbedskyfile", "set skyfile as scrubbed", DIFFTOOL_MODE_TOSCRUBBEDSKYFILE, toscrubbedskyfileArgs);
-    
+    PXOPT_ADD_MODE("-tofullskyfile", "set skyfile as full", DIFFTOOL_MODE_TOFULLSKYFILE, tofullskyfileArgs);
+
     if (!pxGetOptions(stderr, argc, argv, config, modes, argSets)) {
         psError(PS_ERR_UNKNOWN, true, "option parsing failed");
