Index: branches/tap_branches/ppStack/src/ppStackOptions.h
===================================================================
--- branches/tap_branches/ppStack/src/ppStackOptions.h	(revision 25900)
+++ branches/tap_branches/ppStack/src/ppStackOptions.h	(revision 27838)
@@ -9,14 +9,24 @@
     // Setup
     bool convolve;                      // Convolve images?
+    bool matchZPs;                      // Adjust relative fluxes based on transparency analysis?
+    bool photometry;                    // Perform photometry?
     psMetadata *stats;                  // Statistics for output
     FILE *statsFile;                    // File to which to write statistics
-    psArray *imageNames, *maskNames, *varianceNames; // Filenames for the temporary convolved images
+    psArray *origImages, *origMasks, *origVariances; // Filenames of the original images
+    psArray *convImages, *convMasks, *convVariances; // Filenames for the temporary convolved images
+    psArray *origCovars;                // Original covariances matrices
     int num;                            // Number of inputs
+    int quality;                        // Bad data quality flag
     // Prepare
     pmPSF *psf;                         // Target PSF
+    psVector *inputSeeing;              // Input seeing FWHMs
+    float targetSeeing;                 // Target seeing FWHM
+    psVector *exposures;                // Exposure times
     float sumExposure;                  // Sum of exposure times
+    float zp;                           // Zero point for output
     psVector *inputMask;                // Mask for inputs
     psArray *sourceLists;               // Individual lists of sources for matching
     psVector *norm;                     // Normalisation for each image
+    psArray *sources;                   // Matched sources
     // Convolve
     psArray *cells;                     // Cells for convolved images --- a handle for reading again
@@ -26,7 +36,8 @@
     psVector *matchChi2;                // chi^2 for stamps from matching
     psVector *weightings;               // Combination weightings for images (1/noise^2)
-    psArray *covariances;               // Covariance matrices
+    psArray *convCovars;                // Convolved covariance matrices
     // Combine initial
     pmReadout *outRO;                   // Output readout
+    pmReadout *expRO;                   // Exposure readout
     psArray *inspect;                   // Array of arrays of pixels to inspect
     // Rejection