Index: branches/czw_branch/20120906/ppSkycell/src/ppSkycellCamera.c
===================================================================
--- branches/czw_branch/20120906/ppSkycell/src/ppSkycellCamera.c	(revision 34458)
+++ branches/czw_branch/20120906/ppSkycell/src/ppSkycellCamera.c	(revision 34623)
@@ -103,9 +103,19 @@
         return false;
     }
-    if (!pmFPAfileDefineOutput(data->config, NULL, "PPSKYCELL.BIN1")) {
+    pmFPAfile *bin1 = pmFPAfileDefineOutput(data->config, NULL, "PPSKYCELL.BIN1");
+    if (!bin1) {
         psError(psErrorCodeLast(), false, "Unable to define output.");
         return false;
     }
-    if (!pmFPAfileDefineOutput(data->config, NULL, "PPSKYCELL.BIN2")) {
+    pmFPAfile *bin2 = pmFPAfileDefineOutput(data->config, NULL, "PPSKYCELL.BIN2");
+    if (!bin2) {
+        psError(psErrorCodeLast(), false, "Unable to define output.");
+        return false;
+    }
+    if (!pmFPAfileDefineOutput(data->config, bin1->fpa , "PPSKYCELL.BIN1.MASK")) {
+        psError(psErrorCodeLast(), false, "Unable to define output.");
+        return false;
+    }
+    if (!pmFPAfileDefineOutput(data->config, bin2->fpa, "PPSKYCELL.BIN2.MASK")) {
         psError(psErrorCodeLast(), false, "Unable to define output.");
         return false;
Index: branches/czw_branch/20120906/ppSkycell/src/ppSkycellLoop.c
===================================================================
--- branches/czw_branch/20120906/ppSkycell/src/ppSkycellLoop.c	(revision 34458)
+++ branches/czw_branch/20120906/ppSkycell/src/ppSkycellLoop.c	(revision 34623)
@@ -249,4 +249,5 @@
             psFree(view);
 
+	    //	    data->maskVal = 1;
             pmReadout *bin1RO = pmReadoutAlloc(NULL), *bin2RO = pmReadoutAlloc(NULL); // Binned readouts
             if (!pmReadoutRebin(bin1RO, inRO, data->maskVal, data->bin1, data->bin1)) {
@@ -293,4 +294,8 @@
 	  pmFPAfileActivate(data->config->files, true, "PPSKYCELL.BIN1");
 	  pmFPAfileActivate(data->config->files, true, "PPSKYCELL.BIN2");
+/* 	  if (data->masksName) { */
+/* 	    pmFPAfileActivate(data->config->files, true, "PPSKYCELL.BIN1.MASK"); */
+/* 	    pmFPAfileActivate(data->config->files, true, "PPSKYCELL.BIN2.MASK"); */
+/* 	  } */
 	}
 	
@@ -400,4 +405,31 @@
 	  fits1->fileIndex = i;
 
+	  // Do the mask if we need to
+/* 	  if (data->masksName) { */
+/* 	    pmFPAfile *Mask1 = pmFPAfileSelectSingle(data->config->files, "PPSKYCELL.BIN1.MASK", 0); */
+/* 	    Mask1->fpa->hdu = pmHDUAlloc(NULL); */
+/* 	    Mask1->fpa->hdu->header = psMetadataAlloc(); */
+/* 	    psMetadataCopy(Mask1->fpa->hdu->header,fits1->fpa->hdu->header); */
+/* 	    pmChip *Mchip1 = pmFPAfileThisChip(data->config->files, view, "PPSKYCELL.BIN1.MASK"); */
+/* 	    psMetadataAddS32(Mchip1->concepts,PS_LIST_TAIL,"CHIP.XPARITY", PS_META_REPLACE,"",1); */
+/* 	    psMetadataAddS32(Mchip1->concepts,PS_LIST_TAIL,"CHIP.YPARITY", PS_META_REPLACE,"",1); */
+	    
+/* 	    pmCell *Mcell1 = pmFPAfileThisCell(data->config->files, view, "PPSKYCELL.BIN1.MASK"); // Rebinned cell 1 */
+/* 	    /\* 	  // This is a hack to get a functioning header created so the fits images can be written out. *\/ */
+/* 	    psMetadataAddS32(Mcell1->concepts,PS_LIST_TAIL,"CELL.XPARITY", PS_META_REPLACE,"",1); */
+/* 	    psMetadataAddS32(Mcell1->concepts,PS_LIST_TAIL,"CELL.YPARITY", PS_META_REPLACE,"",1); */
+/* 	    psMetadataAddS32(Mcell1->concepts,PS_LIST_TAIL,"CELL.READDIR", PS_META_REPLACE,"",1); */
+	    
+/* 	    pmReadout *Mro1 = pmReadoutAlloc(Mcell1); */
+/* 	    Mro1->image = image1; */
+/* 	    Mro1->mask = mask1; */
+/* 	    Mro1->data_exists = Mcell1->data_exists = Mcell1->parent->data_exists = true; */
+	    
+/* 	    Mask1->save = true; */
+/* 	    Mask1->fileIndex = i; */
+/* 	  } */
+	    
+	    
+	  
 	  // Repeat with second binned image
 	  pmFPAfile *fits2 = pmFPAfileSelectSingle(data->config->files, "PPSKYCELL.BIN2", 0);
@@ -447,4 +479,6 @@
 	  fits2->save = true;
 	  fits2->fileIndex = i;
+
+	  
 	}