Index: unk/Ohana/src/libohana/doc/load_catalog.c
===================================================================
--- /trunk/Ohana/src/libohana/doc/load_catalog.c	(revision 4837)
+++ 	(revision )
@@ -1,263 +1,0 @@
-# include <ohana.h>
-# include <dvo.h>
-
-/* the function in this file uses the old definition of Catalog,
-   and is deprecated by the new locking scheme */
-
-typedef struct {
-  Average *average;
-  Measure *measure; 
-  Missing *missing; 
-  SecFilt *secfilt;
-  Header  header;
-  int Naverage, Nmeasure, Nmissing, Nsecfilt;
-  int *found;
-  int *image;
-  float *X, *Y;
-} Catalog;
-
-Measure *FixOldMeasure (OldMeasure *in, int Nvalues) {
-
-  int i;
-  Measure *out;
-
-  ALLOCATE (out, Measure, Nvalues);
-
-  for (i = 0; i < Nvalues; i++) {
-    out[i].dR = in[i].dR;
-    out[i].dD = in[i].dD;
-    out[i].M  = in[i].M;
-    out[i].dM = in[i].dM;
-    out[i].Mcal = in[i].Mcal;
-    out[i].dophot = in[i].dophot;
-    out[i].source = in[i].source;
-    out[i].t = in[i].t;
-
-    out[i].dt = 0xffff;
-    out[i].averef = in[i].average & 0x00ffffff;
-    out[i].flags  = (in[i].average & 0xff000000) >> 24;
-  }
-
-  free (in);
-  
-  return (out);
-}
-
-Average *FixOldAverage (OldAverage *in, int Nvalues) {
-
-  int i;
-  Average *out;
-
-  ALLOCATE (out, Average, Nvalues);
-
-  for (i = 0; i < Nvalues; i++) {
-    out[i].R       = in[i].R;      
-    out[i].D       = in[i].D;      
-    out[i].M       = in[i].M;      
-    out[i].Xp      = in[i].Xp;     
-    out[i].Xm      = in[i].Xm;     
-    out[i].Nm      = in[i].Nm;     
-    out[i].Nn      = in[i].Nn;     
-    out[i].code    = in[i].code;   
-    out[i].offset  = in[i].offset; 
-    out[i].missing = in[i].missing;
-
-    out[i].dM = 0xffff;
-  }
-
-  free (in);
-  
-  return (out);
-}
-
-SecFilt *FixOldSecFilt (OldSecFilt *in, int Nvalues) {
-
-  int i;
-  SecFilt *out;
-
-  ALLOCATE (out, SecFilt, Nvalues);
-
-  for (i = 0; i < Nvalues; i++) {
-    out[i].M    = in[i].M;      
-    out[i].Xm   = in[i].Xm;      
-
-    out[i].dM   = 0xffff;
-  }
-
-  free (in);
-  
-  return (out);
-}
-
-load_catalog (char *filename, Catalog *catalog, char mode, char VERBOSE) {
-  
-  int Nitems, nitems;
-  int i, Nmeas, Nmiss, size, ssize;
-  int NewMeasure, NewAverage, NewSecFilt;
-  FILE *f;
-  OldMeasure *tmpmeasure;
-  OldAverage *tmpaverage;
-  OldSecFilt *tmpsecfilt;
-  struct stat filestatus;
-
-  /* possible exit status: 
-     0 - serious failure
-     1 - success
-     2 - file non-existent */
-
-  /* read catalog header */
-  if (!fits_read_header (filename, &catalog[0].header)) {
-    if (VERBOSE) fprintf (stderr, "catalog file does not exist: %s\n", filename);
-    return (2);
-  }
-
-  f = fopen (filename, "r");
-  if (f == (FILE *) NULL) {
-    if (VERBOSE) fprintf (stderr, "ERROR: can't read data from catalog file: %s\n", filename);
-    return (FALSE);
-  }
-  fseek (f, catalog[0].header.size, SEEK_SET); 
-
-  catalog[0].Naverage = catalog[0].Nmeasure = catalog[0].Nmissing = catalog[0].Nsecfilt = 0;
-  if (!fits_scan (&catalog[0].header, "NSTARS",   "%d", 1, &catalog[0].Naverage)) return (FALSE);
-  if (!fits_scan (&catalog[0].header, "NMEAS",    "%d", 1, &catalog[0].Nmeasure)) return (FALSE);
-  if (!fits_scan (&catalog[0].header, "NMISS",    "%d", 1, &catalog[0].Nmissing)) return (FALSE);
-  if (!fits_scan (&catalog[0].header, "NSECFILT", "%d", 1, &catalog[0].Nsecfilt)) catalog[0].Nsecfilt = 0;
-  if (!fits_scan (&catalog[0].header, "NEWMEAS",  "%t", 1, &NewMeasure)) NewMeasure = FALSE;
-  if (!fits_scan (&catalog[0].header, "NEWAVES",  "%t", 1, &NewAverage)) NewAverage = FALSE;
-  if (!fits_scan (&catalog[0].header, "NEWSECF",  "%t", 1, &NewSecFilt)) NewSecFilt = FALSE;
-
-  /* predicted file size */
-
-  size = 0;
-  ssize = NewAverage ? sizeof (Average) : sizeof (OldAverage);
-  size += ssize * catalog[0].Naverage;
-
-  ssize = NewMeasure ? sizeof (Measure) : sizeof (OldMeasure);
-  size += ssize * catalog[0].Nmeasure;
-
-  ssize = sizeof (Missing);
-  size += ssize * catalog[0].Nmissing;
-
-  ssize = NewSecFilt ? sizeof (SecFilt) : sizeof (OldSecFilt);
-  size += ssize * catalog[0].Nsecfilt * catalog[0].Naverage;
-
-  size += catalog[0].header.size;
-
-  /* check that file size makes sense */
-  if (stat (filename, &filestatus) == -1) {
-    fprintf (stderr, "ERROR: failed to get status of star catalog\n");
-    exit (1);
-  }
-  if (size != filestatus.st_size) {
-    fprintf (stderr, "ERROR: star catalog has inconsistent size\n");
-    exit (1);
-  } 
-
-  if (catalog[0].Naverage == 0) {
-    if (VERBOSE) fprintf (stderr, "no stars yet in catalog %s\n", filename);
-    fclose (f);
-    return (TRUE);
-  }
-
-  if (mode & LOAD_AVES) {
-    /* read average values */
-    if (NewAverage) {
-      ALLOCATE (catalog[0].average, Average, MAX (catalog[0].Naverage, 1));
-      Nitems = catalog[0].Naverage;
-      nitems = Fread (catalog[0].average, sizeof(Average), Nitems, f, "average");
-    } else {
-      ALLOCATE (tmpaverage, Average, MAX (catalog[0].Naverage, 1));
-      Nitems = catalog[0].Naverage;
-      nitems = Fread (tmpaverage, sizeof(OldAverage), Nitems, f, "oldaverage");
-      catalog[0].average = FixOldAverage (tmpaverage, Nitems);
-    }
-    if (nitems != Nitems) {
-      fprintf (stderr, "ERROR: failed to read averages from catalog file %s\n", filename);
-      fclose (f);
-      return (FALSE);
-    }
-  } else {
-    /* skip over averages */
-    fseek (f, catalog[0].Naverage * sizeof(Average), SEEK_CUR); 
-  }    
-  
-  if (mode & LOAD_MEAS) {
-    /* read measurements */
-    if (NewMeasure) {
-      ALLOCATE (catalog[0].measure, Measure, MAX (catalog[0].Nmeasure, 1));
-      Nitems = catalog[0].Nmeasure;
-      nitems = Fread (catalog[0].measure, sizeof(Measure), Nitems, f, "measure");
-    } else {
-      ALLOCATE (tmpmeasure, OldMeasure, MAX (catalog[0].Nmeasure, 1));
-      Nitems = catalog[0].Nmeasure;
-      nitems = Fread (tmpmeasure, sizeof(OldMeasure), Nitems, f, "oldmeasure");
-      catalog[0].measure = FixOldMeasure (tmpmeasure, Nitems);
-    }
-    if (nitems != Nitems) {
-      fprintf (stderr, "ERROR: failed to read measures from catalog file %s\n", filename);
-      fclose (f);
-      return (FALSE);
-    }
-  } else {
-    /* skip over measures */
-    fseek (f, catalog[0].Nmeasure * sizeof(Measure), SEEK_CUR); 
-  } 
-
-  if (mode & LOAD_MISS) {
-    /* read missing */
-    ALLOCATE (catalog[0].missing, Missing, MAX (catalog[0].Nmissing, 1));
-    Nitems = catalog[0].Nmissing;
-    nitems = Fread (catalog[0].missing, sizeof(Missing), Nitems, f, "missing");
-    if (nitems != Nitems) {
-      fprintf (stderr, "ERROR: failed to read missing from catalog file %s\n", filename);
-      fclose (f);
-      return (FALSE);
-    }
-  } else {
-    /* skip over missings */
-    fseek (f, catalog[0].Nmissing * sizeof(Missing), SEEK_CUR); 
-  }
-  
-  if (mode & LOAD_SECF) {
-    /* read missing */
-    if (NewSecFilt) {
-      Nitems = catalog[0].Naverage * catalog[0].Nsecfilt;
-      ALLOCATE (catalog[0].secfilt, SecFilt, MAX (Nitems, 1));
-      nitems = Fread (catalog[0].secfilt, sizeof(SecFilt), Nitems, f, "secfilt");
-    } else {
-      Nitems = catalog[0].Naverage * catalog[0].Nsecfilt;
-      ALLOCATE (tmpsecfilt, OldSecFilt, MAX (Nitems, 1));
-      nitems = Fread (tmpsecfilt, sizeof(OldSecFilt), Nitems, f, "oldsecfilt");
-      catalog[0].secfilt = FixOldSecFilt (tmpsecfilt, Nitems);
-    } 
-    if (nitems != Nitems) {
-      fprintf (stderr, "ERROR: failed to read secondary filters from catalog file %s\n", filename);
-      fclose (f);
-      return (FALSE);
-    }
-  } else {
-    /* skip over secfilts */
-    fseek (f, catalog[0].Naverage * catalog[0].Nsecfilt * sizeof(SecFilt), SEEK_CUR); 
-  }
-
-  fclose (f);
-  
-  if (VERBOSE) fprintf (stderr, "read %d stars from catalog file %s (%d measurements, %d missing, %d secondary filters)\n", 
-	   catalog[0].Naverage, filename, catalog[0].Nmeasure, catalog[0].Nmissing, catalog[0].Nsecfilt);
-
-  if (mode & LOAD_AVES) {
-    for (i = Nmeas = Nmiss = 0; i < catalog[0].Naverage; i++) {
-      Nmeas += catalog[0].average[i].Nm; 
-      Nmiss += catalog[0].average[i].Nn; 
-    }
-    if ((Nmeas != catalog[0].Nmeasure) || (Nmiss != catalog[0].Nmissing)) {
-      fprintf (stderr, "ERROR: data in catalog %s is corrupt, sums don't check\n", filename);
-      fprintf (stderr, "ERROR: Nmeas: %d, %d\n", Nmeas, catalog[0].Nmeasure);
-      fprintf (stderr, "ERROR: Nmiss: %d, %d\n", Nmiss, catalog[0].Nmissing);
-      return (FALSE);
-    }
-  }
-  return (TRUE);
-}
-
Index: unk/Ohana/src/libohana/doc/save_catalog.c
===================================================================
--- /trunk/Ohana/src/libohana/doc/save_catalog.c	(revision 4837)
+++ 	(revision )
@@ -1,89 +1,0 @@
-# include <ohana.h>
-# include <dvo.h>
-
-/* the function in this file uses the old definition of Catalog,
-   and is deprecated by the new locking scheme */
-
-typedef struct {
-  Average *average;
-  Measure *measure; 
-  Missing *missing; 
-  SecFilt *secfilt;
-  Header  header;
-  int Naverage, Nmeasure, Nmissing, Nsecfilt;
-  int *found;
-  int *image;
-  float *X, *Y;
-} Catalog;
-
-save_catalog (char *filename, Catalog *catalog, char VERBOSE) {
-
-  int i, Nitems, nitems, mode;
-  FILE *f;
-
-  if (catalog[0].Naverage == 0) {
-    if (VERBOSE) fprintf (stderr, "no stars in catalog, skipping\n");
-    return (2);
-  }
-
-  f = fopen (filename, "w");
-  if (f == NULL) {
-    fprintf (stderr, "ERROR: can't create new catalog file: %s\n", filename);
-    return (0);
-  }
-
-  mode = S_IRUSR | S_IWUSR | S_IRGRP | S_IWGRP | S_IROTH | S_IWOTH;
-  chmod (filename, mode);
- 
-  fits_modify (&catalog[0].header, "NSTARS",   "%d", 1, catalog[0].Naverage);
-  fits_modify (&catalog[0].header, "NMEAS",    "%d", 1, catalog[0].Nmeasure);
-  fits_modify (&catalog[0].header, "NMISS",    "%d", 1, catalog[0].Nmissing);
-  fits_modify (&catalog[0].header, "NSECFILT", "%d", 1, catalog[0].Nsecfilt);
-  fits_modify (&catalog[0].header, "NEWMEAS",  "%t", 1, TRUE);
-  fits_modify (&catalog[0].header, "NEWAVES",  "%t", 1, TRUE);
-  fits_modify (&catalog[0].header, "NEWSECF",  "%t", 1, TRUE);
-
-  nitems = Fwrite (catalog[0].header.buffer, 1, catalog[0].header.size, f, "char");
-  if (nitems != catalog[0].header.size) {
-    fprintf (stderr, "ERROR: failed to write header\n");
-    return (0);
-  }
-
-  Nitems = catalog[0].Naverage;
-  nitems = Fwrite (catalog[0].average, sizeof(Average), Nitems, f, "average");
-  if (nitems != Nitems) {
-    fprintf (stderr, "ERROR: failed to write catalog file aves %s\n", filename);
-    return (0);
-  }
-  
-  Nitems = catalog[0].Nmeasure;
-  nitems = Fwrite (catalog[0].measure, sizeof(Measure), Nitems, f, "measure");
-  if (nitems != Nitems) {
-    fprintf (stderr, "ERROR: failed to write catalog file meas %s\n", filename);
-    return (0);
-  }
-
-  Nitems = catalog[0].Nmissing;
-  nitems = Fwrite (catalog[0].missing, sizeof(Missing), Nitems, f, "missing");
-  if (nitems != Nitems) {
-    fprintf (stderr, "ERROR: failed to write catalog file miss %s\n", filename);
-    return (0);
-  }
-
-  Nitems = catalog[0].Naverage * catalog[0].Nsecfilt;
-  nitems = Fwrite (catalog[0].secfilt, sizeof(SecFilt), Nitems, f, "secfilt");
-  if (nitems != Nitems) {
-    fprintf (stderr, "ERROR: failed to write catalog file secondary filters %s\n", filename);
-    return (0);
-  }
-
-  fclose (f);
-  return (1);
-
-}
-
-  /* possible exit status: 
-     0 - serious failure
-     1 - success
-     2 - data non-existent */
-
